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Affymetrix 3'-Assays

Affymetrix All Exon

Affymetrix 500K SNP

Affymetrix TG

Real Time PCR

TaqMan SNP

Data Analysis

Genomics Software


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Frequently Asked Questions

Helpful Information

Contact Information

Equipment/Resources


KUGR History

Microarray Primer

Basics of Microarray Data Analysis

Data Analysis Tutorial

Microarray Comparisons

Faculty Director

Scott A. Ness, Ph.D.


KUGR Personnel

Gavin Pickett, Ph.D.

Marilee Morgan, M.S.

Tel: (505) 272-5564
Room: CRF 118

HSC Resources

Department of Molecular Genetics and Microbiology

HSC Research Commons

UNM Cancer Research and Treatment Center

UNM NIEHS Center

BSGP Graduate Program

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Keck-UNM Genomics Resource


KUGR Microarrays and Gene Expression Services*

KUGR User Fees and Prices (FY '08-'09)

Affymetrix System

Other Services

* All KUGR services and facilities are available for UNM users only, including UNM faculty at LRRI.

KUGR User Fees and Prices* (FY '06-'07)

Affymetrix GeneChip System
Affymetrix GeneChip per chip charge
$45 ea
Full Service Analysis (plus GeneChips)
$190/sample
Additional Amplification (for small samples)
$120/sample
Laboratory Labor Charge
$60/hr
Microarray Data Analysis
$80/hr
Other User Fees**
Nanodrop Spectrophotometer (per lab)
$100/yr
Agilent RNA/DNA Analysis System (per lab)
$400/yr
Individual chips for Agilent system + reagents
$20/chip
* All services and facilities are available for UNM users only. Members of the UNM Cancer Research and Treatment Center or the NIEHS Center may qualify for cost-share price reductions on most KUGR services.

** Please contact the KUGR facility staff for other services.

Descriptions of Services and Facility Fees*

Affymetrix System

Full Service (RNA to Data) is available and is highly recommended for researchers who have limited or no experience working with RNA. The listed price includes all the required materials, kits and supplies (except GeneChips). Contact the KUGR staff for more details.

The cost to process an RNA sample is $190, including all reagents and labor (except the GeneChips), and including initial data analysis. Small amounts of RNA may require an additional amplification step at $120 per sample.

There is an additional $45 per-chip charge for each GeneChip analyzed on the Affymetrix instrument.

Additional microarray data analysis is sometime required and is charged at $80/hr.

None of the prices listed here include the cost of the Affymetrix GeneChips, which should be ordered through the UNM Cancer Research and Treatment Center. Contact the KUGR staff for price and ordering information.

Other Services

Agilent RNA/DNA Analysis System: $400 annual user fee (per lab)

The KUGR staff are highly skilled and experienced at most molecular biology methods, including real-time PCR, high throughput sequencing and human SNP detection. These services can be arranged and are billed at an hourly rate for labor plus reagents.

* All services and facilities are available for UNM users only.